How to find the largest rectangular submatrix
$begingroup$
I have a sparse non-symmetric binary matrix with a block structure. The dimensions of the matrix are thousands long x less than one hundred wide.
How do I identify the largest non-contiguous rectangular sub-matrix consisting only of 1
-entries?
edit: The pattern is either very sparse, or there are very few large submatrices, however the blocks are likely to overlap.
In the simplified example below, it would be elements {2,4} towards {6,6}.
$mat=left( begin{array}{ccc}
1&1&1&1&0&0\
1&1&1&1&1&1\
0&0&0&1&1&1\
1&1&0&1&1&1\
1&1&1&1&1&1\
1&1&1&1&1&1\
end{array} right)$
matrix graphs-and-networks regions
$endgroup$
|
show 7 more comments
$begingroup$
I have a sparse non-symmetric binary matrix with a block structure. The dimensions of the matrix are thousands long x less than one hundred wide.
How do I identify the largest non-contiguous rectangular sub-matrix consisting only of 1
-entries?
edit: The pattern is either very sparse, or there are very few large submatrices, however the blocks are likely to overlap.
In the simplified example below, it would be elements {2,4} towards {6,6}.
$mat=left( begin{array}{ccc}
1&1&1&1&0&0\
1&1&1&1&1&1\
0&0&0&1&1&1\
1&1&0&1&1&1\
1&1&1&1&1&1\
1&1&1&1&1&1\
end{array} right)$
matrix graphs-and-networks regions
$endgroup$
$begingroup$
How is this related to graphs and networks? Might there be an additional structure behind the matrix? For example, ifmat
is an adjacency matrix of a graph, you might be looking for a maximal complete subgraph or a clique. Szabolcs' package"IGraphM`"
has tools for that...
$endgroup$
– Henrik Schumacher
2 hours ago
1
$begingroup$
You still want to solve the problem for general binary matrices? (It is not unlikely that his discrete optimization problem is a very hard...)
$endgroup$
– Henrik Schumacher
2 hours ago
1
$begingroup$
If you want non-contiguous too, then this is indeed the clique problem, which is NP-complete, and there's not going to be a simpler solution. UseFindClique
, then filter for blocks that also have 1s on the diagonal.
$endgroup$
– Szabolcs
2 hours ago
1
$begingroup$
BeforeFindClique
, remove every row/column that has a 0 on the diagonal.
$endgroup$
– Szabolcs
2 hours ago
1
$begingroup$
I added the size (thousands long, less than a hundred wide and that I am looking for non-contiguous solutions.
$endgroup$
– Sander
1 hour ago
|
show 7 more comments
$begingroup$
I have a sparse non-symmetric binary matrix with a block structure. The dimensions of the matrix are thousands long x less than one hundred wide.
How do I identify the largest non-contiguous rectangular sub-matrix consisting only of 1
-entries?
edit: The pattern is either very sparse, or there are very few large submatrices, however the blocks are likely to overlap.
In the simplified example below, it would be elements {2,4} towards {6,6}.
$mat=left( begin{array}{ccc}
1&1&1&1&0&0\
1&1&1&1&1&1\
0&0&0&1&1&1\
1&1&0&1&1&1\
1&1&1&1&1&1\
1&1&1&1&1&1\
end{array} right)$
matrix graphs-and-networks regions
$endgroup$
I have a sparse non-symmetric binary matrix with a block structure. The dimensions of the matrix are thousands long x less than one hundred wide.
How do I identify the largest non-contiguous rectangular sub-matrix consisting only of 1
-entries?
edit: The pattern is either very sparse, or there are very few large submatrices, however the blocks are likely to overlap.
In the simplified example below, it would be elements {2,4} towards {6,6}.
$mat=left( begin{array}{ccc}
1&1&1&1&0&0\
1&1&1&1&1&1\
0&0&0&1&1&1\
1&1&0&1&1&1\
1&1&1&1&1&1\
1&1&1&1&1&1\
end{array} right)$
matrix graphs-and-networks regions
matrix graphs-and-networks regions
edited 14 mins ago
Sander
asked 2 hours ago
SanderSander
1,109512
1,109512
$begingroup$
How is this related to graphs and networks? Might there be an additional structure behind the matrix? For example, ifmat
is an adjacency matrix of a graph, you might be looking for a maximal complete subgraph or a clique. Szabolcs' package"IGraphM`"
has tools for that...
$endgroup$
– Henrik Schumacher
2 hours ago
1
$begingroup$
You still want to solve the problem for general binary matrices? (It is not unlikely that his discrete optimization problem is a very hard...)
$endgroup$
– Henrik Schumacher
2 hours ago
1
$begingroup$
If you want non-contiguous too, then this is indeed the clique problem, which is NP-complete, and there's not going to be a simpler solution. UseFindClique
, then filter for blocks that also have 1s on the diagonal.
$endgroup$
– Szabolcs
2 hours ago
1
$begingroup$
BeforeFindClique
, remove every row/column that has a 0 on the diagonal.
$endgroup$
– Szabolcs
2 hours ago
1
$begingroup$
I added the size (thousands long, less than a hundred wide and that I am looking for non-contiguous solutions.
$endgroup$
– Sander
1 hour ago
|
show 7 more comments
$begingroup$
How is this related to graphs and networks? Might there be an additional structure behind the matrix? For example, ifmat
is an adjacency matrix of a graph, you might be looking for a maximal complete subgraph or a clique. Szabolcs' package"IGraphM`"
has tools for that...
$endgroup$
– Henrik Schumacher
2 hours ago
1
$begingroup$
You still want to solve the problem for general binary matrices? (It is not unlikely that his discrete optimization problem is a very hard...)
$endgroup$
– Henrik Schumacher
2 hours ago
1
$begingroup$
If you want non-contiguous too, then this is indeed the clique problem, which is NP-complete, and there's not going to be a simpler solution. UseFindClique
, then filter for blocks that also have 1s on the diagonal.
$endgroup$
– Szabolcs
2 hours ago
1
$begingroup$
BeforeFindClique
, remove every row/column that has a 0 on the diagonal.
$endgroup$
– Szabolcs
2 hours ago
1
$begingroup$
I added the size (thousands long, less than a hundred wide and that I am looking for non-contiguous solutions.
$endgroup$
– Sander
1 hour ago
$begingroup$
How is this related to graphs and networks? Might there be an additional structure behind the matrix? For example, if
mat
is an adjacency matrix of a graph, you might be looking for a maximal complete subgraph or a clique. Szabolcs' package "IGraphM`"
has tools for that...$endgroup$
– Henrik Schumacher
2 hours ago
$begingroup$
How is this related to graphs and networks? Might there be an additional structure behind the matrix? For example, if
mat
is an adjacency matrix of a graph, you might be looking for a maximal complete subgraph or a clique. Szabolcs' package "IGraphM`"
has tools for that...$endgroup$
– Henrik Schumacher
2 hours ago
1
1
$begingroup$
You still want to solve the problem for general binary matrices? (It is not unlikely that his discrete optimization problem is a very hard...)
$endgroup$
– Henrik Schumacher
2 hours ago
$begingroup$
You still want to solve the problem for general binary matrices? (It is not unlikely that his discrete optimization problem is a very hard...)
$endgroup$
– Henrik Schumacher
2 hours ago
1
1
$begingroup$
If you want non-contiguous too, then this is indeed the clique problem, which is NP-complete, and there's not going to be a simpler solution. Use
FindClique
, then filter for blocks that also have 1s on the diagonal.$endgroup$
– Szabolcs
2 hours ago
$begingroup$
If you want non-contiguous too, then this is indeed the clique problem, which is NP-complete, and there's not going to be a simpler solution. Use
FindClique
, then filter for blocks that also have 1s on the diagonal.$endgroup$
– Szabolcs
2 hours ago
1
1
$begingroup$
Before
FindClique
, remove every row/column that has a 0 on the diagonal.$endgroup$
– Szabolcs
2 hours ago
$begingroup$
Before
FindClique
, remove every row/column that has a 0 on the diagonal.$endgroup$
– Szabolcs
2 hours ago
1
1
$begingroup$
I added the size (thousands long, less than a hundred wide and that I am looking for non-contiguous solutions.
$endgroup$
– Sander
1 hour ago
$begingroup$
I added the size (thousands long, less than a hundred wide and that I am looking for non-contiguous solutions.
$endgroup$
– Sander
1 hour ago
|
show 7 more comments
2 Answers
2
active
oldest
votes
$begingroup$
A brute force approach:
mat = {{1, 1, 1, 1, 0, 0}, {1, 1, 1, 1, 1, 1}, {0, 0, 0, 1, 1, 1}, {1, 1, 0, 1, 1, 1},
{1, 1, 1, 1, 1, 1}, {1, 1, 1, 1, 1, 1}};
pairs = Transpose /@ MaximalBy[DeleteDuplicates[CoordinateBounds /@
Subsets[SparseArray[mat]["NonzeroPositions"], {2}]],
Min[#] Total[#, 2] &@mat[[## & @@ Span @@@ #]] &]
{{{2, 4}, {6, 6}}}
$endgroup$
add a comment |
$begingroup$
Update: This answer is not correct but for referencing, because the Subsets
does not give all the possible slices of the matrix.
mat = {{1, 1, 1, 1, 0, 0}, {1, 1, 1, 1, 1, 1}, {0, 0, 0, 1, 1, 1}, {1,
1, 0, 1, 1, 1}, {1, 1, 1, 1, 1, 1}, {1, 1, 1, 1, 1, 1}};
mat//MatrixForm//TeXForm
$left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 0 & 0 \
1 & 1 & 1 & 1 & 1 & 1 \
0 & 0 & 0 & 1 & 1 & 1 \
1 & 1 & 0 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right)$
lst = Subsets@mat;
result = DeleteDuplicates@(MatrixForm /@ Select[lst, DeleteDuplicates@Flatten@# == {1} &]) // Sort;
result // TeXForm
$
left{left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right),left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right),left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right)right}
$
Is this ok? I'm not sure to apply Transpose
to the last one of the result
.
$endgroup$
$begingroup$
Thanks Jerry, there seem to be two issues: 1 the largest sub-matrix in the example is 5x3, your answer results in (after transpose) a 6x3 sub-matrix; Also, I am concerned the Subset will explode beyond memory capacity once we work with large matrices? 2. I would like to recover the coordinates of where the sub-matrix is residing.
$endgroup$
– Sander
50 mins ago
$begingroup$
@Sander Here is a similar question in other language, see geeksforgeeks.org/…
$endgroup$
– Jerry
43 mins ago
add a comment |
Your Answer
StackExchange.ifUsing("editor", function () {
return StackExchange.using("mathjaxEditing", function () {
StackExchange.MarkdownEditor.creationCallbacks.add(function (editor, postfix) {
StackExchange.mathjaxEditing.prepareWmdForMathJax(editor, postfix, [["$", "$"], ["\\(","\\)"]]);
});
});
}, "mathjax-editing");
StackExchange.ready(function() {
var channelOptions = {
tags: "".split(" "),
id: "387"
};
initTagRenderer("".split(" "), "".split(" "), channelOptions);
StackExchange.using("externalEditor", function() {
// Have to fire editor after snippets, if snippets enabled
if (StackExchange.settings.snippets.snippetsEnabled) {
StackExchange.using("snippets", function() {
createEditor();
});
}
else {
createEditor();
}
});
function createEditor() {
StackExchange.prepareEditor({
heartbeatType: 'answer',
autoActivateHeartbeat: false,
convertImagesToLinks: false,
noModals: true,
showLowRepImageUploadWarning: true,
reputationToPostImages: null,
bindNavPrevention: true,
postfix: "",
imageUploader: {
brandingHtml: "Powered by u003ca class="icon-imgur-white" href="https://imgur.com/"u003eu003c/au003e",
contentPolicyHtml: "User contributions licensed under u003ca href="https://creativecommons.org/licenses/by-sa/3.0/"u003ecc by-sa 3.0 with attribution requiredu003c/au003e u003ca href="https://stackoverflow.com/legal/content-policy"u003e(content policy)u003c/au003e",
allowUrls: true
},
onDemand: true,
discardSelector: ".discard-answer"
,immediatelyShowMarkdownHelp:true
});
}
});
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
StackExchange.ready(
function () {
StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fmathematica.stackexchange.com%2fquestions%2f190162%2fhow-to-find-the-largest-rectangular-submatrix%23new-answer', 'question_page');
}
);
Post as a guest
Required, but never shown
2 Answers
2
active
oldest
votes
2 Answers
2
active
oldest
votes
active
oldest
votes
active
oldest
votes
$begingroup$
A brute force approach:
mat = {{1, 1, 1, 1, 0, 0}, {1, 1, 1, 1, 1, 1}, {0, 0, 0, 1, 1, 1}, {1, 1, 0, 1, 1, 1},
{1, 1, 1, 1, 1, 1}, {1, 1, 1, 1, 1, 1}};
pairs = Transpose /@ MaximalBy[DeleteDuplicates[CoordinateBounds /@
Subsets[SparseArray[mat]["NonzeroPositions"], {2}]],
Min[#] Total[#, 2] &@mat[[## & @@ Span @@@ #]] &]
{{{2, 4}, {6, 6}}}
$endgroup$
add a comment |
$begingroup$
A brute force approach:
mat = {{1, 1, 1, 1, 0, 0}, {1, 1, 1, 1, 1, 1}, {0, 0, 0, 1, 1, 1}, {1, 1, 0, 1, 1, 1},
{1, 1, 1, 1, 1, 1}, {1, 1, 1, 1, 1, 1}};
pairs = Transpose /@ MaximalBy[DeleteDuplicates[CoordinateBounds /@
Subsets[SparseArray[mat]["NonzeroPositions"], {2}]],
Min[#] Total[#, 2] &@mat[[## & @@ Span @@@ #]] &]
{{{2, 4}, {6, 6}}}
$endgroup$
add a comment |
$begingroup$
A brute force approach:
mat = {{1, 1, 1, 1, 0, 0}, {1, 1, 1, 1, 1, 1}, {0, 0, 0, 1, 1, 1}, {1, 1, 0, 1, 1, 1},
{1, 1, 1, 1, 1, 1}, {1, 1, 1, 1, 1, 1}};
pairs = Transpose /@ MaximalBy[DeleteDuplicates[CoordinateBounds /@
Subsets[SparseArray[mat]["NonzeroPositions"], {2}]],
Min[#] Total[#, 2] &@mat[[## & @@ Span @@@ #]] &]
{{{2, 4}, {6, 6}}}
$endgroup$
A brute force approach:
mat = {{1, 1, 1, 1, 0, 0}, {1, 1, 1, 1, 1, 1}, {0, 0, 0, 1, 1, 1}, {1, 1, 0, 1, 1, 1},
{1, 1, 1, 1, 1, 1}, {1, 1, 1, 1, 1, 1}};
pairs = Transpose /@ MaximalBy[DeleteDuplicates[CoordinateBounds /@
Subsets[SparseArray[mat]["NonzeroPositions"], {2}]],
Min[#] Total[#, 2] &@mat[[## & @@ Span @@@ #]] &]
{{{2, 4}, {6, 6}}}
answered 1 hour ago
kglrkglr
180k9200413
180k9200413
add a comment |
add a comment |
$begingroup$
Update: This answer is not correct but for referencing, because the Subsets
does not give all the possible slices of the matrix.
mat = {{1, 1, 1, 1, 0, 0}, {1, 1, 1, 1, 1, 1}, {0, 0, 0, 1, 1, 1}, {1,
1, 0, 1, 1, 1}, {1, 1, 1, 1, 1, 1}, {1, 1, 1, 1, 1, 1}};
mat//MatrixForm//TeXForm
$left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 0 & 0 \
1 & 1 & 1 & 1 & 1 & 1 \
0 & 0 & 0 & 1 & 1 & 1 \
1 & 1 & 0 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right)$
lst = Subsets@mat;
result = DeleteDuplicates@(MatrixForm /@ Select[lst, DeleteDuplicates@Flatten@# == {1} &]) // Sort;
result // TeXForm
$
left{left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right),left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right),left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right)right}
$
Is this ok? I'm not sure to apply Transpose
to the last one of the result
.
$endgroup$
$begingroup$
Thanks Jerry, there seem to be two issues: 1 the largest sub-matrix in the example is 5x3, your answer results in (after transpose) a 6x3 sub-matrix; Also, I am concerned the Subset will explode beyond memory capacity once we work with large matrices? 2. I would like to recover the coordinates of where the sub-matrix is residing.
$endgroup$
– Sander
50 mins ago
$begingroup$
@Sander Here is a similar question in other language, see geeksforgeeks.org/…
$endgroup$
– Jerry
43 mins ago
add a comment |
$begingroup$
Update: This answer is not correct but for referencing, because the Subsets
does not give all the possible slices of the matrix.
mat = {{1, 1, 1, 1, 0, 0}, {1, 1, 1, 1, 1, 1}, {0, 0, 0, 1, 1, 1}, {1,
1, 0, 1, 1, 1}, {1, 1, 1, 1, 1, 1}, {1, 1, 1, 1, 1, 1}};
mat//MatrixForm//TeXForm
$left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 0 & 0 \
1 & 1 & 1 & 1 & 1 & 1 \
0 & 0 & 0 & 1 & 1 & 1 \
1 & 1 & 0 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right)$
lst = Subsets@mat;
result = DeleteDuplicates@(MatrixForm /@ Select[lst, DeleteDuplicates@Flatten@# == {1} &]) // Sort;
result // TeXForm
$
left{left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right),left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right),left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right)right}
$
Is this ok? I'm not sure to apply Transpose
to the last one of the result
.
$endgroup$
$begingroup$
Thanks Jerry, there seem to be two issues: 1 the largest sub-matrix in the example is 5x3, your answer results in (after transpose) a 6x3 sub-matrix; Also, I am concerned the Subset will explode beyond memory capacity once we work with large matrices? 2. I would like to recover the coordinates of where the sub-matrix is residing.
$endgroup$
– Sander
50 mins ago
$begingroup$
@Sander Here is a similar question in other language, see geeksforgeeks.org/…
$endgroup$
– Jerry
43 mins ago
add a comment |
$begingroup$
Update: This answer is not correct but for referencing, because the Subsets
does not give all the possible slices of the matrix.
mat = {{1, 1, 1, 1, 0, 0}, {1, 1, 1, 1, 1, 1}, {0, 0, 0, 1, 1, 1}, {1,
1, 0, 1, 1, 1}, {1, 1, 1, 1, 1, 1}, {1, 1, 1, 1, 1, 1}};
mat//MatrixForm//TeXForm
$left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 0 & 0 \
1 & 1 & 1 & 1 & 1 & 1 \
0 & 0 & 0 & 1 & 1 & 1 \
1 & 1 & 0 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right)$
lst = Subsets@mat;
result = DeleteDuplicates@(MatrixForm /@ Select[lst, DeleteDuplicates@Flatten@# == {1} &]) // Sort;
result // TeXForm
$
left{left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right),left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right),left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right)right}
$
Is this ok? I'm not sure to apply Transpose
to the last one of the result
.
$endgroup$
Update: This answer is not correct but for referencing, because the Subsets
does not give all the possible slices of the matrix.
mat = {{1, 1, 1, 1, 0, 0}, {1, 1, 1, 1, 1, 1}, {0, 0, 0, 1, 1, 1}, {1,
1, 0, 1, 1, 1}, {1, 1, 1, 1, 1, 1}, {1, 1, 1, 1, 1, 1}};
mat//MatrixForm//TeXForm
$left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 0 & 0 \
1 & 1 & 1 & 1 & 1 & 1 \
0 & 0 & 0 & 1 & 1 & 1 \
1 & 1 & 0 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right)$
lst = Subsets@mat;
result = DeleteDuplicates@(MatrixForm /@ Select[lst, DeleteDuplicates@Flatten@# == {1} &]) // Sort;
result // TeXForm
$
left{left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right),left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right),left(
begin{array}{cccccc}
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
1 & 1 & 1 & 1 & 1 & 1 \
end{array}
right)right}
$
Is this ok? I'm not sure to apply Transpose
to the last one of the result
.
edited 1 hour ago
answered 1 hour ago
JerryJerry
1,252112
1,252112
$begingroup$
Thanks Jerry, there seem to be two issues: 1 the largest sub-matrix in the example is 5x3, your answer results in (after transpose) a 6x3 sub-matrix; Also, I am concerned the Subset will explode beyond memory capacity once we work with large matrices? 2. I would like to recover the coordinates of where the sub-matrix is residing.
$endgroup$
– Sander
50 mins ago
$begingroup$
@Sander Here is a similar question in other language, see geeksforgeeks.org/…
$endgroup$
– Jerry
43 mins ago
add a comment |
$begingroup$
Thanks Jerry, there seem to be two issues: 1 the largest sub-matrix in the example is 5x3, your answer results in (after transpose) a 6x3 sub-matrix; Also, I am concerned the Subset will explode beyond memory capacity once we work with large matrices? 2. I would like to recover the coordinates of where the sub-matrix is residing.
$endgroup$
– Sander
50 mins ago
$begingroup$
@Sander Here is a similar question in other language, see geeksforgeeks.org/…
$endgroup$
– Jerry
43 mins ago
$begingroup$
Thanks Jerry, there seem to be two issues: 1 the largest sub-matrix in the example is 5x3, your answer results in (after transpose) a 6x3 sub-matrix; Also, I am concerned the Subset will explode beyond memory capacity once we work with large matrices? 2. I would like to recover the coordinates of where the sub-matrix is residing.
$endgroup$
– Sander
50 mins ago
$begingroup$
Thanks Jerry, there seem to be two issues: 1 the largest sub-matrix in the example is 5x3, your answer results in (after transpose) a 6x3 sub-matrix; Also, I am concerned the Subset will explode beyond memory capacity once we work with large matrices? 2. I would like to recover the coordinates of where the sub-matrix is residing.
$endgroup$
– Sander
50 mins ago
$begingroup$
@Sander Here is a similar question in other language, see geeksforgeeks.org/…
$endgroup$
– Jerry
43 mins ago
$begingroup$
@Sander Here is a similar question in other language, see geeksforgeeks.org/…
$endgroup$
– Jerry
43 mins ago
add a comment |
Thanks for contributing an answer to Mathematica Stack Exchange!
- Please be sure to answer the question. Provide details and share your research!
But avoid …
- Asking for help, clarification, or responding to other answers.
- Making statements based on opinion; back them up with references or personal experience.
Use MathJax to format equations. MathJax reference.
To learn more, see our tips on writing great answers.
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
StackExchange.ready(
function () {
StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fmathematica.stackexchange.com%2fquestions%2f190162%2fhow-to-find-the-largest-rectangular-submatrix%23new-answer', 'question_page');
}
);
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
$begingroup$
How is this related to graphs and networks? Might there be an additional structure behind the matrix? For example, if
mat
is an adjacency matrix of a graph, you might be looking for a maximal complete subgraph or a clique. Szabolcs' package"IGraphM`"
has tools for that...$endgroup$
– Henrik Schumacher
2 hours ago
1
$begingroup$
You still want to solve the problem for general binary matrices? (It is not unlikely that his discrete optimization problem is a very hard...)
$endgroup$
– Henrik Schumacher
2 hours ago
1
$begingroup$
If you want non-contiguous too, then this is indeed the clique problem, which is NP-complete, and there's not going to be a simpler solution. Use
FindClique
, then filter for blocks that also have 1s on the diagonal.$endgroup$
– Szabolcs
2 hours ago
1
$begingroup$
Before
FindClique
, remove every row/column that has a 0 on the diagonal.$endgroup$
– Szabolcs
2 hours ago
1
$begingroup$
I added the size (thousands long, less than a hundred wide and that I am looking for non-contiguous solutions.
$endgroup$
– Sander
1 hour ago