label propagation on R graph












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$begingroup$


I want to run the algorithm label propagation (Xiaojin Zhu(2005),Semi-Supervised Learning with Graphs ) on a retweet graph in R. I have found that exist several functions for similar tasks as: label.prop (RANKS library), sslLabelProp (SSL library) and cluster_label_prop (igraph library). However, neither them result useful to me.



cluster_label_prop is for clustering and it's not my goal -I want to assing labels to every node by a subset known labels.



sslLabelProp doesn't recieved a graph as input.



label.prop appears to be the right one but is not clear how to use it and i haven't found a clear example. The code that I have tried is this:



usuarios<-c(0:(length(V(net))-1))
usuarios[0:50] = -1
usuarios[50:(length(V(net))-1)] = 1
ind.pos2 <- which(usuarios==-1);

labeled<-label.prop(as.matrix(net), ind.pos2, tmax = 10, eps = 1e-05, norm = FALSE);


But I got the error




Error in M %*% pold : requires numeric/complex matrix/vector arguments




How can I tag all my nodes by a subset of them using label propagation?










share|improve this question







New contributor




Juan Manuel Ortiz de Zarate is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
Check out our Code of Conduct.







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    0












    $begingroup$


    I want to run the algorithm label propagation (Xiaojin Zhu(2005),Semi-Supervised Learning with Graphs ) on a retweet graph in R. I have found that exist several functions for similar tasks as: label.prop (RANKS library), sslLabelProp (SSL library) and cluster_label_prop (igraph library). However, neither them result useful to me.



    cluster_label_prop is for clustering and it's not my goal -I want to assing labels to every node by a subset known labels.



    sslLabelProp doesn't recieved a graph as input.



    label.prop appears to be the right one but is not clear how to use it and i haven't found a clear example. The code that I have tried is this:



    usuarios<-c(0:(length(V(net))-1))
    usuarios[0:50] = -1
    usuarios[50:(length(V(net))-1)] = 1
    ind.pos2 <- which(usuarios==-1);

    labeled<-label.prop(as.matrix(net), ind.pos2, tmax = 10, eps = 1e-05, norm = FALSE);


    But I got the error




    Error in M %*% pold : requires numeric/complex matrix/vector arguments




    How can I tag all my nodes by a subset of them using label propagation?










    share|improve this question







    New contributor




    Juan Manuel Ortiz de Zarate is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
    Check out our Code of Conduct.







    $endgroup$















      0












      0








      0





      $begingroup$


      I want to run the algorithm label propagation (Xiaojin Zhu(2005),Semi-Supervised Learning with Graphs ) on a retweet graph in R. I have found that exist several functions for similar tasks as: label.prop (RANKS library), sslLabelProp (SSL library) and cluster_label_prop (igraph library). However, neither them result useful to me.



      cluster_label_prop is for clustering and it's not my goal -I want to assing labels to every node by a subset known labels.



      sslLabelProp doesn't recieved a graph as input.



      label.prop appears to be the right one but is not clear how to use it and i haven't found a clear example. The code that I have tried is this:



      usuarios<-c(0:(length(V(net))-1))
      usuarios[0:50] = -1
      usuarios[50:(length(V(net))-1)] = 1
      ind.pos2 <- which(usuarios==-1);

      labeled<-label.prop(as.matrix(net), ind.pos2, tmax = 10, eps = 1e-05, norm = FALSE);


      But I got the error




      Error in M %*% pold : requires numeric/complex matrix/vector arguments




      How can I tag all my nodes by a subset of them using label propagation?










      share|improve this question







      New contributor




      Juan Manuel Ortiz de Zarate is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
      Check out our Code of Conduct.







      $endgroup$




      I want to run the algorithm label propagation (Xiaojin Zhu(2005),Semi-Supervised Learning with Graphs ) on a retweet graph in R. I have found that exist several functions for similar tasks as: label.prop (RANKS library), sslLabelProp (SSL library) and cluster_label_prop (igraph library). However, neither them result useful to me.



      cluster_label_prop is for clustering and it's not my goal -I want to assing labels to every node by a subset known labels.



      sslLabelProp doesn't recieved a graph as input.



      label.prop appears to be the right one but is not clear how to use it and i haven't found a clear example. The code that I have tried is this:



      usuarios<-c(0:(length(V(net))-1))
      usuarios[0:50] = -1
      usuarios[50:(length(V(net))-1)] = 1
      ind.pos2 <- which(usuarios==-1);

      labeled<-label.prop(as.matrix(net), ind.pos2, tmax = 10, eps = 1e-05, norm = FALSE);


      But I got the error




      Error in M %*% pold : requires numeric/complex matrix/vector arguments




      How can I tag all my nodes by a subset of them using label propagation?







      r graphs






      share|improve this question







      New contributor




      Juan Manuel Ortiz de Zarate is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
      Check out our Code of Conduct.











      share|improve this question







      New contributor




      Juan Manuel Ortiz de Zarate is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
      Check out our Code of Conduct.









      share|improve this question




      share|improve this question






      New contributor




      Juan Manuel Ortiz de Zarate is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
      Check out our Code of Conduct.









      asked 1 hour ago









      Juan Manuel Ortiz de ZarateJuan Manuel Ortiz de Zarate

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      New contributor




      Juan Manuel Ortiz de Zarate is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
      Check out our Code of Conduct.





      New contributor





      Juan Manuel Ortiz de Zarate is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
      Check out our Code of Conduct.






      Juan Manuel Ortiz de Zarate is a new contributor to this site. Take care in asking for clarification, commenting, and answering.
      Check out our Code of Conduct.






















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